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Основные публикации

  1. Novikova S.V., Oreshkova N.V., Sharov V.V., Kuzmin D.A., Demidko D.A., Bisirova E.M., Zhirnova D.F., Belokopytova L.V., Babushkina E.A., Krutovsky K.V. (2024) Study of the genetic mechanisms of Siberian stone pine (Pinus sibirica Du Tour) adaptation to the climatic and pest outbreak stresses using dendrogenomic approach. International Journal of Molecular Sciences, 25(21):11767. https://doi.org/10.3390/ijms252111767
  2. Gavrikov V.L., Sharafutdinov R.A., Fertikov A.I., Vaganov E.A. (2024) Properties of ions may explain elemental stoichiometry in late- and early-wood: a case study in Scots pine tree rings. Journal of Forestry Research, 35:126. https://doi.org/10.1007/s11676-024-01779-7
  3. Belokopytova L.V., Zhirnova D.F., Mehrotra, N., Shah S.K., Babushkina E.A., Vaganov E.A. (2024) Improving the equation of nonlinear relationships between cell anatomical parameters of conifer wood. Trees, online first https://doi.org/10.1007/s00468-024-02559-w
  4. Makhnykina A., Vaganov E., Panov A., Polosukhina D., Prokushkin A. (2024) An Interseasonal Comparison of Soil Respiration in Xeric and Mesic Pine Forest Ecosystems in Central Siberia. Atmosphere, 15:988. https://doi.org/10.3390/atmos15080988
  5. Zhirnova D.F., Belokopytova L.V., Upadhyay K.K., Koshurnikova N.N., Mapitov N.B., Kholdaenko Y.A., Vaganov E.A., Babushkina E.A. (2024) Climatic reactions in the radial growth of Pinus sibirica Du Tour fr om the lower to the upper lim it along the Western Sayan Mountains, Siberia. Forest Ecology and Management, 563:121995. https://doi.org/10.1016/j.foreco.2024.121995.
  6. Khudykh T.A., Belokopytova L.V., Yang B., Kholdaenko Y.A., Babushkina E.A., Vaganov E.A. (2024) New Methods in Digital Wood Anatomy: The Use of Pixel-Contrast Densitometry with Example of Angiosperm Shrubs in Southern Siberia. Biology, 13(4):223. https://doi.org/10.3390/biology13040223
  7. Makhnykina A.V., Vaganov E.A., Panov A.V., Koshurnikova N.N., Prokushkin A.S. (2024) The Pulses of Soil CO2 Emission in Response to Rainfall Events in Central Siberia: Revisiting the Overall Frost-Free Season CO2 Flux. Forests, 15:355. https://doi.org/10.3390/f15020355
  8. Gavrikov V.L., Fertikov A.I., Sharafutdinov R.A., Tang Z., Vaganov E.A. (2024) Early-Wood vs. Late-Wood in Scots Pine: Finding Stable Relationships in Elemental Distribution. Sci, 6:4. https://doi.org/10.3390/sci6010004
  9. Babushkina E.A., Dergunov D.R., Zharkov M.S., Belokopytova L.V., Zhirnova D.F., Yang B., Liu J., Peng X., Vaganov E.A. (2024) Wood anatomy chronologies of Scots pine in the foothills of the Western Sayan (Siberia). Journal of Forestry Research, 35:45. https://doi.org/10.1007/s11676-023-01692-5
  10. Zelenov G.K., Belokopytova L.V., Babushkina E.A., Zhirnova D.F., Yang B., Peng X., Liu J., Sitnikov G.A., Vaganov E.A. (2024) Reconstruction of Seasonal Kinetics in Conifer Radial Growth from Daily Meteorological Conditions, Tree-Ring Width, and Radial Size of Tracheids. Forests, 15(2):249. https://doi.org/10.3390/f15020249
  11. Zharkov M.S., Yang B., Babushkina E.A., Zhirnova D.F., Vaganov E.A., Shishov V.V. (2024) Tracheids vs. Tree Rings as Proxies for Dendroclimatic Reconstruction at High Altitude: The Case of Pinus sibirica Du Tour. Forests, 15:167. https://doi.org/10.3390/f15010167
  12. Novikova S.V., Oreshkova N.V., Sharov V.V., Zhirnova D.F., Belokopytova L.V., Babushkina E.A., Krutovsky K.V. (2023) Study of the Genetic Adaptation Mechanisms of Siberian Larch (Larix sibirica Ledeb.) Regarding Climatic Stresses Based on Dendrogenomic Analysis. Forests, 14(12):2358. https://doi.org/10.3390/f14122358
  13. Belousova D.A., Shishov V.V., Arzac A., Popkova M.I., Babushkina E.A., Huang J.-G., Yang B., Vaganov E.A. (2023) VS-Cambium-Developer: A New Predictive Model of Cambium Functioning under the Influence of Environmental Factors. Plants, 12(20): 3594. https://doi.org/10.3390/plants12203594
  14. Belokopytova L.V., Zhirnova D.F., Yang B., Babushkina E.A., Vaganov E.A. (2023) Modeling of the statistical distribution of tracheids in conifer rings: finding universal criterion for earlywood–latewood distinction. Plants, 12(19): 3454. https://doi.org/10.3390/plants12193454
  15. Makhnykina A.V., Tychkov I.I., Prokushkin A.S., Pyzhev A.I., Vaganov E.A. (2023) Factors of soil CO2 emission in boreal forests: evidence from Central Siberia. iForest, 16: 86-94. https://doi.org/10.3832/ifor4097-016
  16. Shishov V.V., Arzac A., Popkova M.I., Yang B., He M., Vaganov E.A. (2023) Experimental and theoretical analysis of tree-ring growth in cold climates. In: Girona M.M., Morin H., Gauthier S., Bergeron Y. (eds) Boreal Forests in the Face of Climate Change. Springer, Cham, pp. 295-321. https://doi.org/10.1007/978-3-031-15988-6_11
  17. Gavrikov V.L., Fertikov A.I., Vidus V.E., Sharafutdinov R.A., Vaganov E.A. (2023) Elemental variability in stems of Pinus sylvestris L.: Whether a single core can represent all the stem. Diversity, 15(2):281. https://doi.org/10.3390/d15020281
  18. Churakova (Sidorova) O.V., Porter T.J., Zharkov M.S., Fonti M.V., Barinov V.V., Taynik A.V., Kirdyanov A.V., Knorre A.A., Wegmann M., Trushkina T.V., Koshurnikova N.N., Vaganov E.A., Myglan V.S., Siegwolf R.T.W., Saurer M. (2023) Climate impacts on tree-ring stable isotopes across the Northern Hemispheric boreal zone. Science of Total Environment, 161644. https://doi.org/10.1016/j.scitotenv.2023.161644
  19. Babushkina E.A., Zhirnova D.F., Belokopytova L.V., Mehrotra N., Dergunov D.R., Shah S.K., Vaganov E.A. (2024) Conifer quantitative wood anatomy as proxy data: application in agricultural yield reconstruction. Trees, 38:573-589. https://doi.org/10.1007/s00468-023-02437-x
  20. Kholdaenko Y.A., Babushkina E.A., Belokopytova L.V., Zhirnova D.F., Koshurnikova N.N., Yang B., Vaganov E.A. (2023) The more the merrier or the fewer the better fare? Effects of stand density on tree growth and climatic response in a Scots pine plantation. Forests, 14(5):915. https://doi.org/10.3390/f14050915
  21. Mapitov N.B., Belokopytova L.V., Zhirnova D.F., Abilova S.B., Ualiyeva R.M., Bitkeyeva A.A., Babushkina E.A., Vaganov E.A. (2023) Factors limiting radial growth of conifers on their semiarid borders across Kazakhstan. Biology, 12(4):604. https://doi.org/10.3390/biology12040604
  22. Ваганов Е.А., Пыжев А.И., Курбатова М.В. [и др.] Перспективы реализации лесоклиматических проектов: потенциал регионов Енисейской Сибири. СФУ: Красноярск, 2023. 160 с.
  23. Gavrikov V., Fertikov A., Sharafutdinov R., Pyzhev A., Vaganov E. (2022) Dendrochemical challenge in climate science: whether chemical elements in wood reflect the fluctuations in weather parameters. Plants, 11(23):3240. https://doi.org/10.3390/plants11233240
  24. Zhirnova D.F., Belokopytova L.V., Krutovsky K.V., Kholdaenko Y.A., Babushkina E.A., Vaganov E.A. (2022) Spatial-coherent dynamics and climatic signals in the radial growth of Siberian stone pine (Pinus sibirica Du Tour) in subalpine stands along the Western Sayan Mountains. Forests, 13(12):1994. https://doi.org/10.3390/f13121994
  25. Babushkina E.A., Sitnikov G.A., Upadhyay K.K., Zhirnova D.F., Zelenov G.K., Vaganov E.A., Belokopytova L.V. (2022) Seasonal growth of pine tree rings: Comparison of direct observations and simulation. Forests, 13(12):1978. https://doi.org/10.3390/f13121978
  26. Демина А.В., Жирнова Д.Ф., Белокопытова Л.В., Упадхай К.К., Бабушкина Е.А. (2022) Детализация климатического отклика анатомических параметров древесины и фенологии ксилогенеза сосны обыкновенной в лесостепях Юга Сибири. Журнал Сибирского федерального университета. Биология, 15(2):183-201. https://doi.org/10.17516/1997-1389-0382 (PDF)
  27. Büntgen U., Arseneault D., Boucher É., Churakova (Sidorova) O.V., Gennaretti F., Crivellaro A., Hughes M.K., Kirdyanov A.V., Klippel L., Krusic P.J., Linderholm H.W., Ljungqvist F.C., Ludescher J., McCormick M., Myglan V.S., Nicolussi K., Piermattei A., Oppenheimer C., Reinig F., Sigl M., Vaganov E.A., Esper J. (2022) Recognising bias in Common Era temperature reconstructions. Dendrochronologia, 74: 125982. https://doi.org/10.1016/j.dendro.2022.125982
  28. Belokopytova L.V., Zhirnova D.F., Krutovsky K.V., Mapitov N.B., Vaganov E.A., Babushkina E.A. (2022) Species- and age-specific growth reactions to extreme droughts of the keystone tree species across forest-steppe and sub-taiga habitats of South Siberia. Forests, 13(7):1027. https://doi.org/10.3390/f13071027
  29. Zharkov M.S., Huang J.-G., Yang B., Babushkina E.A., Belokopytova L.V., Vaganov E.A., Zhirnova D.F., Ilyin V.A., Popkova M.I.,  Shishov V.V. (2022) Tracheidogram’s classification as a new potential proxy in high-resolution dendroclimatic reconstructions. Forests, 13(7):970. https://doi.org/10.3390/f13070970
  30. Kholdaenko Y.A., Belokopytova L.V., Zhirnova D.F., Upadhyay K.K. Tripathi S.K., Koshurnikova N.N., Sobachkin R.S., Babushkina E.A., Vaganov E.A. (2022) Stand density effects on tree growth and climatic response in Picea obovata Ledeb. plantations. Forest Ecology and Management, 519:120349. https://doi.org/10.1016/j.foreco.2022.120349
  31. Zhirnova D.F., Belokopytova L.V., Upadhyay K.K., Tripathi S.K., Babushkina E.A., Vaganov E.A. (2022) 495-year wood anatomical record of Siberian stone pine (Pinus sibirica Du Tour) as climatic proxy on the timberline. Forests, 13(2):247. https://doi.org/10.3390/f13020247
  32. Belokopytova L.V., Zhirnova D.F., Meko D.M., Babushkina E.A., Vaganov E.A., Krutovsky K.V. (2021) Tree rings reveal the impact of soil temperature on larch growth in the forest-steppe of Siberia. Forests, 12(12):1765. https://doi.org/10.3390/f12121765
  33. Demina A.V., Belokopytova L.V., Zhirnova D.F., Mehrotra N., Shah S.K., Babushkina E.A., Vaganov E.A. (2022) Degree of connectivity in reconstructed precipitation dynamics and extremes for semiarid regions across South Siberia. Dendrochronologia, 71:125903. https://doi.org/10.1016/j.dendro.2021.125903
  34. Babushkina E.A., Dergunov D.R., Belokopytova L.V., Zhirnova D.F., Upadhyay K.K., Tripathi S.K., Zharkov M.S., Vaganov E.A. (2021) Non-linear response to cell number revealed and eliminated from long-term tracheid measurements of Scots pine in Southern Siberia. Frontiers in Plant Science, 12:719796. https://doi.org/10.3389/fpls.2021.719796 
  35. Arzac A., Fonti M.V., Vaganov E.A. (2022) An overview on dendrochronology and quantitative wood anatomy studies of conifers in Southern Siberia (Russia). Progress in Botany [book series], Vol. 83, pp. 161-181. Springer, Berlin, Heidelberg. https://doi.org/10.1007/124_2021_52
  36. Белоусова Д.А., Шишов В.В., Бабушкина Е.А., Ваганов Е.А. (2021) VS-Cambium-Developer: новый подход к моделированию функционирования камбиальной зоны хвойных под воздействием факторов окружающей среды. Экология, 5: 335-345. http://doi.org/10.31857/S0367059721050048 [Belousova D.A., Shishov V.V., Babushkina E.A., Vaganov E.A. (2021) VS-Cambium-Developer: a new approach to modeling the functioning of the cambial zone of conifers under the influence of environmental factors. Russian Journal of Ecology, 52: 358-367. https://doi.org/10.1134/S1067413621050040]
  37. Belokopytova, L.V., Meko, D.M., Zhirnova, D.F. Babushkina, E.A., Vaganov, E.A. (2021) Spatial classification of moisture-sensitive pine and larch tree-ring chronologies within Khakass–Minusinsk Depression, South Siberia. Trees, 35(6):2133-2139. https://doi.org/10.1007/s00468-021-02196-7
  38. Zhirnova D.F., Belokopytova L.V., Meko, D.M., Babushkina E.A., Vaganov E.A. (2021) Climate change and tree growth in the Khakass-Minusinsk Depression (South Siberia) impacted by large water reservoirs. Scientific Reports, 11: 14266. https://doi.org/10.1038/s41598-021-93745-0
  39. Жарков М.С. Белокопытова Л.В., Фонти М.В., Бабушкина Е.А., Ваганов Е.А. (2021) Что может дать количественная анатомия для кинетики ксилогенеза: анализ радиальных размеров клеток. Журнал Сибирского федерального университета. Биология, 14(1): 84–96. https://doi.org/10.17516/1997-1389-0342
  40. Zhirnova D.F., Belokopytova L.V., Babushkina E.A., Crivellaro A., Vaganov E.A. (2021) Earlywood structure of evergreen conifers near forest line is habitat driven but latewood depends on species and seasons. Trees, 35(2): 479–492. https://doi.org/10.1007/s00468-020-02050-2
  41. Костякова Т.В., Белокопытова Л.В., Жирнова Д.Ф., Бабушкина Е.А., Ваганов Е.А. (2021) Дендрохронологическая индикация вспышек размножения филлофагов по радиальному приросту лиственницы в лесостепной зоне Республики Тыва. Сибирский экологический журнал, 1: 46–60. https://doi.org/10.15372/SEJ20210105 [Kostyakova T.V., Belokopytova L.V., Zhirnova D.F., Babushkina E.A., Vaganov E.A. (2021) Dendrochronological indication of phyllophages’ outbreaks by larch radial growth in the forest-steppe zone of the Republic of Tyva. Contemporary Problems of Ecology, 14(1): 37–48. https://doi.org/10.1134/S1995425521010054]
  42. Babushkina E.A., Zhirnova D.F., Belokopytova L.V., Mehrotra N., Shah S.K., Keler V.V., Vaganov E.A. (2021) Prospects of using tree‐ring earlywood and latewood width for reconstruction of crops yield on example of South Siberia. Forests, 12(2):174. https://doi.org/10.3390/f12020174
  43. Popkova M.I., Shishov V.V., Vaganov E.A., Fonti M.V., Kirdyanov A.V., Babushkina E.A., Huang J.-G., Rossi S. (2020) Contribution of xylem anatomy to tree-ring width of two larch species in permafrost and non-permafrost zones of Siberia. Forests, 11(12): 1343. https://doi.org/10.3390/f11121343.
  44. Belokopytova L.V., Fonti P., Babushkina E.A., Zhirnova D.F., Vaganov E.A. (2020) Evidences of different drought sensitivity in xylem cell developmental processes in South Siberia Scots pines. Forests, 11: 294. https://doi.org/10.3390/f11121294
  45. Fonti M.V., Babushkina E.A., Zhirnova D.F., Vaganov E.A. (2020) Xylogenesis of Scots pine in an uneven-aged stand of the Minusinsk Depression (Southern Siberia). Журнал Сибирского федерального университета. Биология, 13(2): 197-207. https://doi.org/10.17516/1997-1389-0323
  46. Vaganov E.A., Babushkina E.A., Belokopytova L.V., Zhirnova D.F. (2020) Small fluctuations in cell wall thickness in pine and spruce xylem: Signal from cambium?. PLOS ONE 15(5): e0233106. https://doi.org/10.1371/journal.pone.0233106
  47. Dyachuk P., Arzac A., Peresunko P., Videnin S., Ilyin V., Assaulianov R., Babushkina E.A., Zhirnova D., Belokopytova L., Vaganov E.A., Shishov V.V. (2020) AutoCellRow (ACR) – A new tool for the automatic quantification of cell radial files in conifer images. Dendrochronologia, 60: 125687. https://doi.org/10.1016/j.dendro.2020.125687
  48. Babushkina E.A., Zhirnova D.F., Belokopytova L.V., Vaganov E.A. (2020) Warming induced changes in wood matter accumulation in tracheid walls of spruce. Journal of Mountain Science, 17(1): 16-30. https://doi.org/10.1007/s11629-019-5516-6
  49. Zhirnova D.F., Babushkina E.A.,  Belokopytova L.V., Vaganov E.A. (2020) To which side are the scales swinging? Growth stability of Siberian larch under permanent moisture deficit with periodic droughts. Forest Ecology and Management, 459: 117841. https://doi.org/10.1016/j.foreco.2019.117841
  50. Zhirnova D.F., Belokopytova L.V., Barabantsova A.E., Babushkina E.A., Vaganov E.A. (2020) What prevails in climatic response of Pinus sylvestris in-between its range limits in mountains: slope aspect or elevation? International Journal of Biometeorology, 64: 333-344. https://doi.org/10.1007/s00484-019-01811-0
  51. Babushkina E.A., Zhirnova D.F., Belokopytova L.V.,Tychkov I.I., Vaganov E.A., Krutovsky K.V. (2019) Response of four tree species to changing climate in a moisture-limited area of South Siberia. Forests, 10(11), 999. https://doi.org/10.3390/f10110999
  52. Zhirnova D.F., Babushkina E.A., Belokopytova L.V., Yurin D.O., Vaganov E.A. (2019) Sunshine as culprit: It induces early spring physiological drought in dark coniferous (Pinus sibirica and Abies sibirica) alpine forest. Forest Ecology and Management, 449:117458. http://dx.doi.org/10.1016/j.foreco.2019.117458 (PDF)
  53. Tychkov I.I., Sviderskaya I.V., Babushkina E.A., Popkova M.I., Vaganov E.A., Shishov V.V. (2019) How can the parameterization of a process-based model help us understand real tree-ring growth? Trees, 33(2):345-357. https://doi.org/10.1007/s00468-018-1780-2
  54. Belokopytova L.V., Babushkina E.A., Zhirnova D.F., Panyushkina I.P., Vaganov E.A. (2019) Pine and larch tracheids capture seasonal variations of climatic signal at moisture-limited sites. Trees, 33(1): 227-242. https://doi.org/10.1007/s00468-018-1772-2
  55. Babushkina E.A., Belokopytova L.V., Zhirnova D.F., Vaganov E.A. (2019) Siberian spruce tree ring anatomy: imprint of development processes and their high-temporal environmental regulation. Dendrochronologia, 53: 114-124. https://doi.org/10.1016/j.dendro.2018.12.003
  56. Babushkina E., Belokopytova L., Zhirnova D., Barabantsova A., Vaganov E. (2018) Divergent growth trends and climatic response of Picea obovata along elevational gradient in Western Sayan mountains, Siberia.  Journal of Mountain Science, 15(11): 2378-2397. https://doi.org/10.1007/s11629-018-4974-6
  57. Belousova D., Popkova M., Babushkina E., Shishov V. (2018) Timing of cell production in tree rings: an automatic two-step procedure in R. SGEM2018 Conference Proceedings. Section Forest Ecosystems. pp. 1053-1060. http://dx.doi.org/10.5593/sgem2018/3.2/S14.134 
  58. Belokopytova L., Zhirnova D., Kostyakova T., Babushkina E. (2018) Dynamics of moisture regime and its reconstruction from a tree-ring width chronology of Pinus sylvestris in the downstream basin of the Selenga River, Russia. Journal of Arid Land, 10(6): 877-891. https://doi.org/10.1007/s40333-018-0025-y
  59. Arzac A., López-Cepero J.M., Babushkina E.A., Gomez S. (2018) Applying methods of hard tissues preparation for wood anatomy: Imaging polished samples embedded in polymethylmethacrylate. Dendrochronologia, 51:76-81. https://doi.org/10.1016/j.dendro.2018.08.005 (PDF)
  60. Popkova M., Vaganov E.A., Shishov V.V., Babushkina E.A., Rossi S., Bryukhanova M.V., Fonti P. (2018) Modeled tracheidograms disclose drought influence on Pinus sylvestris tree-rings structure from Siberian forest-steppe. Frontiers in Plant Science, 9:1144. https://doi.org/10.3389/fpls.2018.01144 (PDF)
  61. Белокопытова Л.В., Бабушкина Е.А., Жирнова Д.Ф., Панюшкина И.П., Ваганов Е.А. (2018) Климатический отклик радиального прироста хвойных лесостепи юга Сибири: сравнение трех подходов. Сибирский экологический журнал. 4: 411-424. http://dx.doi.org/10.15372/SEJ20180403 [Belokopytova L.V., Babushkina E.A., Zhirnova D.F., Panyushkina I.P., Vaganov E.A. Сlimatic response of conifer radial growth in forest-steppes of South Siberia: comparison of three approaches. Contemporary problems of Ecology, 11(4):366-376. https://doi.org/10.1134/S1995425518040030] (PDF-RU,PDF-EN)
  62. Babushkina E.A., Belokopytova L.V., Shah S.K., Zhirnova D.F. (2018) Past crops yield dynamics reconstruction from tree-ring chronologies in the forest-steppe zone based on low- and high-frequency components. International Journal of Biometeorology, 62(5): 861-871. http://dx.doi.org/10.1007/s00484-017-1488-9 (PDF)
  63. Бабушкина Е.А., Белокопытова Л.В., Костякова Т.В., Кокова В.И. (2018) Характеристики ранней и поздней древесины Pinus sylvestris в семиаридных природных зонах Южной Сибири. Экология. №3: 174-183. https://doi.org/10.7868/S0367059718030022 [Babushkina E.A., Belokopytova L.V., Kostyakova T.V. and Kokova V.I. (2018) Earlywood and latewood features of Pinus sylvestris in semiarid natural zones of South Siberia. Russian Journal of Ecology, 49(3): 209-217. https://doi.org/10.1134/S1067413618030013]. (PDF-RU, PFD-EN).
  64. Arzac A., Babushkina E.A., Fonti P., Slobodchikova V., Sviderskaya I.V., Vaganov E.A. (2018). Evidences of wider latewood in Pinus sylvestris from a forest-steppe of Southern Siberia. Dendrochronologia, 49: 1-8. https://doi.org/10.1016/j.dendro.2018.02.007 (PDF)
  65. Babushkina E.A., Belokopytova L.V., Zhirnova D.F., Shah S.K., Kostyakova T.V.  (2018) Climatically driven yield variability of major crops in Khakassia (South Siberia). International Journal of Biometeorology, 62(6): 939–948. http://dx.doi.org/10.1007/s00484-017-1496-9 (PDF)
  66. Kostyakova T.V., Touchan R., Babushkina E.A., Belokopytova L.V. (2018) Precipitation reconstruction for the Khakassia region, Siberia, from tree rings. Holocene, 28(3):377-385. https://doi.org/10.1177/0959683617729450 (PDF)
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  73. Popkova M., Babushkina E., Tychkov I., Shishov V. (2016) Time identification of tree rings cell production due to climate factors in Siberia. SGEM2016 Conference Proceedings. Section Forest Ecosystems, 3(2). pp. 677-684. URL: http://vs-genn.ru/recent_publications/sgem_paper_Popkova.pdf
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